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2nd year microbiology very important summery

 Here’s a concise and complete list of important bacteria by Gram reaction and shape — suitable for MBBS-level microbiology:


🟣 GRAM POSITIVE COCCI

(Purple on Gram stain, spherical)

  1. Staphylococcus

    • S. aureus

    • S. epidermidis

    • S. saprophyticus

  2. Streptococcus

    • S. pyogenes (Group A)

    • S. agalactiae (Group B)

    • S. pneumoniae

    • Viridans streptococci (S. mutans, S. sanguis)

    • Enterococcus faecalis (Group D)


🟣 GRAM POSITIVE BACILLI

(Purple rods)

  1. Spore-forming (Aerobes & Anaerobes)

    • Bacillus anthracis

    • Bacillus cereus

    • Clostridium tetani

    • Clostridium botulinum

    • Clostridium perfringens

    • Clostridium difficile

  2. Non-spore-forming

    • Corynebacterium diphtheriae

    • Listeria monocytogenes

    • Lactobacillus

    • Actinomyces israelii (filamentous)

    • Nocardia (partially acid-fast, branching)


🔴 GRAM NEGATIVE COCCI

(Pink spherical bacteria)

  1. Neisseria meningitidis

  2. Neisseria gonorrhoeae

  3. Moraxella catarrhalis


🔴 GRAM NEGATIVE BACILLI

(Pink rods)

Enterobacteriaceae Family

  • Escherichia coli

  • Klebsiella pneumoniae

  • Enterobacter cloacae

  • Proteus mirabilis

  • Salmonella typhi

  • Shigella dysenteriae

  • Yersinia pestis

Others

  • Pseudomonas aeruginosa

  • Vibrio cholerae

  • Campylobacter jejuni

  • Helicobacter pylori

  • Haemophilus influenzae (coccobacillus)

  • Bordetella pertussis (coccobacillus)

  • Brucella species (coccobacillus)

  • Francisella tularensis (coccobacillus)

  • Legionella pneumophila

  • Bacteroides fragilis (anaerobic)


🟣🔴 GRAM VARIABLE or COCCOBACILLI (Intermediate forms)

Coccobacilli = short rods / oval

  • Haemophilus influenzae (Gram-negative)

  • Bordetella pertussis (Gram-negative)

  • Brucella (Gram-negative)

  • Francisella tularensis (Gram-negative)

  • Acinetobacter baumannii (Gram-negative)

  • Gardnerella vaginalis (Gram-variable)


📘 Quick Summary Table

Category Shape Gram +ve Gram –ve
Cocci Round Staphylococcus, Streptococcus, Enterococcus Neisseria, Moraxella
Bacilli Rod Bacillus, Clostridium, Corynebacterium, Listeria E. coli, Salmonella, Klebsiella, Pseudomonas
Coccobacilli Short rod/oval — (rare) Haemophilus, Bordetella, Brucella, Francisella

Would you like me to make this into a mnemonic chart (for rapid recall before exams)?


Perfect 👍— here’s a complete and MBBS-level list of important biochemical tests used in bacteriology for identification and differentiation of organisms.

I’ll organize them by broad categories (for easier memorization + exam writing).


🧪 I. BASIC BIOCHEMICAL TESTS

Test Principle / Purpose Positive Result Example
Catalase test Detects enzyme catalase (breaks H₂O₂ → H₂O + O₂) Staphylococcus (+), Streptococcus (–)
Coagulase test Detects enzyme coagulase (clots plasma) Staph. aureus (+)
Oxidase test Detects cytochrome oxidase enzyme Pseudomonas, Neisseria (+)
Indole test Detects ability to produce indole from tryptophan E. coli (+), Klebsiella (–)
Methyl Red (MR) test Detects mixed acid fermentation E. coli (+)
Voges-Proskauer (VP) test Detects acetoin production Enterobacter, Klebsiella (+)
Citrate utilization test Detects ability to use citrate as carbon source Klebsiella, Enterobacter (+)
Urease test Detects urease enzyme (urea → ammonia + CO₂) Proteus, Klebsiella (+)
Nitrate reduction test Detects nitrate → nitrite reduction Enterobacteriaceae (+)
TSI (Triple Sugar Iron) agar test Detects sugar fermentation (glucose, lactose, sucrose) and H₂S/gas production Salmonella → alkaline slant/acid butt + H₂S
KIA (Kligler Iron Agar) Similar to TSI but without sucrose Same interpretation as TSI
H₂S production test Detects hydrogen sulfide gas Salmonella, Proteus (+)
Motility test Detects bacterial motility E. coli (+), Klebsiella (–)

🔬 II. ENZYME & SPECIAL DIFFERENTIATION TESTS

Test Use / Organism differentiation
DNase test S. aureus (+) vs S. epidermidis (–)
PYR test S. pyogenes (+) and Enterococcus (+)
Bile esculin hydrolysis Enterococcus, Group D Strep (+)
Optochin sensitivity S. pneumoniae sensitive; Viridans Strep resistant
Bacitracin sensitivity S. pyogenes sensitive; S. agalactiae resistant
Novobiocin sensitivity S. epidermidis sensitive; S. saprophyticus resistant
NaCl tolerance (6.5%) Enterococcus grows; Group D non-enterococci do not
Lecithinase test Clostridium perfringens (+)
Nagler’s reaction For Clostridium perfringens α-toxin detection
Reverse CAMP test Clostridium perfringens identification
CAMP test S. agalactiae (+)
String test Vibrio cholerae (positive - mucoid string forms with NaOH)
Oxidation–Fermentation (O-F) test To differentiate oxidizers vs fermenters (Pseudomonas = oxidizer)

💧 III. SUGAR FERMENTATION TESTS

Used to differentiate Enterobacteriaceae and others.

Sugar Fermentation detected by
Glucose Acid/gas production
Lactose E. coli (+), Salmonella (–)
Sucrose Vibrio cholerae (+), V. parahaemolyticus (–)
Mannitol S. aureus (+), S. epidermidis (–)
Maltose N. meningitidis (+), N. gonorrhoeae (–)

🧫 IV. OTHER IMPORTANT TESTS

Test Purpose / Use
CAMP & Reverse CAMP Group B Strep and Clostridium perfringens
Hanging drop motility Vibrio (darting), E. coli (motile), Klebsiella (non-motile)
Satellite test Haemophilus influenzae (requires V factor from S. aureus)
X and V factor requirement Haemophilus identification
Oxidation-Fermentation (Hugh–Leifson medium) Differentiate Pseudomonas vs Enterobacteriaceae
Tellurite reduction Corynebacterium diphtheriae (black colonies)
Eleck’s gel precipitation test Detects diphtheria toxin (immunodiffusion)
Carbohydrate fermentation with gas Detects gas formation in Enterobacteriaceae
Gelatin hydrolysis Proteus, Clostridium (+)

🧠 V. SUMMARY MNEMONIC (for Enterobacteriaceae)

“IMViC = Indole, Methyl Red, Voges–Proskauer, Citrate”

Organism Indole MR VP Citrate
E. coli + +
Klebsiella + +
Enterobacter + +
Proteus vulgaris + + +
Salmonella + +

Would you like me to make a visual summary chart (table + color-coded groups) for quick pre-exam revision? It helps a lot for Micro practicals.


Excellent 👏 Sabyasachi!
Here’s the complete MBBS-level list of culture media — organized clearly by type and use so you can memorize + recall easily for both theory and practicals.


🧫 CULTURE MEDIA – COMPLETE MBBS LIST


🩸 I. BASIC TYPES OF MEDIA (By Function)

Type Purpose Examples
1. Basal / Simple media Support growth of non-fastidious bacteria Nutrient agar, Nutrient broth, Peptone water
2. Enriched media Basal medium + nutrients like blood/serum for fastidious organisms Blood agar, Chocolate agar, Loeffler’s serum slope
3. Enrichment media Liquid media that favor growth of one organism while inhibiting others Selenite F broth (Salmonella), Alkaline peptone water (Vibrio), Tetrathionate broth
4. Selective media Contain inhibitors to suppress unwanted flora MacConkey agar, DCA, XLD, TCBS, Lowenstein–Jensen, Tellurite medium
5. Differential / Indicator media Show color change / visual difference between species MacConkey (lactose fermenters pink), Blood agar (hemolysis types), CLED agar
6. Transport media Maintain viability during transport Stuart’s, Amies, Cary-Blair medium
7. Anaerobic media For anaerobes (contain reducing agents) Robertson’s Cooked Meat broth (RCM), Thioglycollate broth
8. Specialized media For special organisms Lowenstein-Jensen (Mycobacterium), TCBS (Vibrio), BCYE (Legionella)
9. Indicator media Color indicators to detect biochemical reactions MacConkey, EMB, TSI

🧪 II. IMPORTANT CULTURE MEDIA BY ORGANISM

🦠 A. Gram-Positive Cocci

Organism Media
Staphylococcus aureus Nutrient agar, Blood agar (β-hemolytic), Mannitol salt agar (selective + differential)
Streptococcus pyogenes Blood agar (β-hemolysis), Enriched media
S. pneumoniae Blood agar (α-hemolysis), Chocolate agar (better growth), Bile solubility test medium
Enterococcus Blood agar, Bile esculin agar (hydrolysis test)

🦠 B. Gram-Positive Bacilli

Organism Media
Corynebacterium diphtheriae Loeffler’s serum slope, Tellurite blood agar, Potassium tellurite medium
Bacillus anthracis Nutrient agar (Medusa head colonies), Blood agar
Clostridium species Robertson’s Cooked Meat broth (anaerobic), Blood agar (anaerobic jar)
Listeria monocytogenes Blood agar (narrow β-hemolysis)

🦠 C. Gram-Negative Cocci

Organism Media
Neisseria gonorrhoeae Chocolate agar with 5–10% CO₂, Thayer-Martin medium (selective)
Neisseria meningitidis Blood agar, Chocolate agar
Moraxella catarrhalis Nutrient agar, Blood agar

🦠 D. Gram-Negative Bacilli

Organism Media
E. coli, Klebsiella, Enterobacter MacConkey agar (pink LF), EMB agar (E. coli – metallic sheen)
Salmonella, Shigella DCA, XLD agar, SS agar, Selenite F broth (enrichment)
Proteus Nutrient agar (swarming), MacConkey (pale NLF)
Pseudomonas aeruginosa Nutrient agar (green pigment), Cetrimide agar (selective)
Vibrio cholerae Alkaline peptone water (enrichment), TCBS agar (selective – yellow colonies)
Haemophilus influenzae Chocolate agar (needs X & V factors), Satellite phenomenon on Blood agar
Bordetella pertussis Bordet-Gengou agar, Regan-Lowe charcoal agar
Brucella species Blood agar, Castaneda’s biphasic medium
Legionella pneumophila BCYE agar (Buffered Charcoal Yeast Extract)
Yersinia pestis Blood agar, MacConkey (pale colonies), Bipolar staining on smears
Helicobacter pylori Skirrow’s medium (microaerophilic)
Campylobacter jejuni Campy-BAP (microaerophilic, 42°C)

🧫 E. Anaerobes

Organism Media
Clostridium species Robertson’s Cooked Meat broth, Blood agar under anaerobic jar
Bacteroides fragilis Blood agar with kanamycin + vancomycin (anaerobic)
Peptostreptococcus Anaerobic blood agar

🧫 F. Acid-Fast Bacilli

Organism Media
Mycobacterium tuberculosis Lowenstein–Jensen medium, Middlebrook 7H10/7H11 agar
M. leprae Cannot be cultured in vitro (only in footpad of mice or armadillo)

🧫 G. Spirochetes

Organism Media
Leptospira Fletcher’s, Stuart’s, EMJH (Ellinghausen–McCullough–Johnson–Harris) medium
Treponema pallidum Not cultivable in vitro
Borrelia burgdorferi Kelly’s medium (BSK – Barbour-Stoenner-Kelly)

🧫 H. Mycoplasma

Organism Media
Mycoplasma pneumoniae PPLO (Pleuropneumonia-like organism) agar / broth containing cholesterol

🧫 I. Fungi

Organism Media
Candida albicans, Dermatophytes Sabouraud’s Dextrose Agar (SDA)
Cryptococcus neoformans SDA + Niger seed (Bird seed) agar → brown colonies
Histoplasma, Aspergillus SDA, Brain-Heart Infusion agar

🧫 J. Viruses (for reference)

Use Media / System
Virus isolation Tissue culture, chick embryo, animal inoculation (not agar media)

⚗️ III. SPECIAL PURPOSE MEDIA (Quick Revision)

Medium Use
MacConkey agar Gram-negative enteric bacilli, lactose fermentation
Blood agar Hemolysis, fastidious organisms
Chocolate agar Neisseria, Haemophilus
Lowenstein–Jensen Mycobacterium tuberculosis
TCBS Vibrio cholerae
DCA / XLD / SS agar Salmonella, Shigella
Bordet–Gengou / Regan–Lowe Bordetella pertussis
Tellurite agar Corynebacterium diphtheriae
BCYE Legionella pneumophila
Sabouraud’s agar Fungi
PPLO agar Mycoplasma
Cetrimide agar Pseudomonas aeruginosa
Campy-BAP Campylobacter jejuni
Skirrow’s medium Helicobacter pylori
Fletcher’s medium Leptospira
Bile esculin agar Enterococcus
Thayer–Martin agar Neisseria gonorrhoeae
Loeffler’s slope C. diphtheriae (metachromatic granules)
Selenite F broth Salmonella enrichment

Would you like me to make this into a 2-page “Culture Media Chart” (color-coded, ready to print) for your exam revision file?
It helps a lot for the practical table viva.

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